STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCL1RNA terminal phosphate cyclase like 1. (373 aa)    
Predicted Functional Partners:
WDR43
WD repeat domain 43.
   
 0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.998
HEATR1
HEAT repeat containing 1.
   
 0.998
Pwp2
Uncharacterized protein.
   
 
 0.998
UTP4
UTP4 small subunit processome component.
   
 0.998
BYSL
Bystin like.
   
 
 0.998
UTP18
UTP18 small subunit processome component.
   
 0.998
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
 0.997
WDR75
WD repeat domain 75.
   
 0.997
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.