STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain containing 1C. (662 aa)    
Predicted Functional Partners:
I3N3Z2_ICTTR
Uncharacterized protein.
 
  
   0.919
CD151
Tetraspanin.
    
   0.708
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.699
Jaml
Uncharacterized protein.
    
 0.660
SCN2B
Sodium voltage-gated channel beta subunit 2.
    
 0.660
GRAMD2B
GRAM domain containing 2B.
    
 
0.610
GTPBP8
GTP binding protein 8 (putative).
      
 0.599
TSPAN11
Tetraspanin.
    
   0.563
Spice1
Uncharacterized protein.
      
 0.501
UBE2Q2
Ubiquitin conjugating enzyme E2 Q2.
   
    0.470
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.