STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taf7lTAFII55_N domain-containing protein. (294 aa)    
Predicted Functional Partners:
TAF12
TATA-box binding protein associated factor 12.
    
 0.991
TAF6
TATA-box binding protein associated factor 6.
    
 0.991
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.991
Taf11
TATA-box binding protein associated factor 11.
    
 0.991
Taf1
Transcription initiation factor TFIID subunit.
    
 0.991
TAF2
TATA-box binding protein associated factor 2.
    
 0.991
TAF3
TATA-box binding protein associated factor 3.
    
 0.985
TBP
TATA-box binding protein.
    
 0.982
TAF6L
TATA-box binding protein associated factor 6 like.
    
 0.981
TAF5
TATA-box binding protein associated factor 5.
    
 0.981
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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