STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMPKDM1 protein kinase. (629 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
  0.754
RHOQ
Ras homolog family member Q.
  
 0.723
MYL7
Myosin light chain 7.
    
 0.713
PTEN
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.699
ITSN2
Intersectin 2.
   
 0.696
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
    
 0.692
LIMK1
LIM domain kinase 1.
    
0.692
LIMK2
LIM domain kinase 2.
    
0.692
RHOJ
Ras homolog family member J.
  
 0.684
RHOBTB2
Rho related BTB domain containing 2.
  
 0.682
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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