TFAM protein (Ictidomys tridecemlineatus) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

TFAM

Transcription factor A, mitochondrial. (246 aa)

Predicted Functional Partners:

POLRMT

0.996

TFB2M

0.994

PPARGC1A

0.927

POLG

0.827

TFB1M

0.815

NRF1

0.787

GTF2H4

0.769

NOL11

0.756

GTF2H1

0.754

SRFBP1

0.742

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GTF2H1	GTF2H4	ENSSTOP00000000013	ENSSTOP00000023175	General transcription factor IIH subunit 1.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
GTF2H1	POLRMT	ENSSTOP00000000013	ENSSTOP00000003083	General transcription factor IIH subunit 1.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.485
GTF2H1	TFAM	ENSSTOP00000000013	ENSSTOP00000001454	General transcription factor IIH subunit 1.	Transcription factor A, mitochondrial.	0.754
GTF2H4	GTF2H1	ENSSTOP00000023175	ENSSTOP00000000013	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	General transcription factor IIH subunit 1.	0.999
GTF2H4	POLRMT	ENSSTOP00000023175	ENSSTOP00000003083	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.477
GTF2H4	TFAM	ENSSTOP00000023175	ENSSTOP00000001454	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Transcription factor A, mitochondrial.	0.769
NOL11	TFAM	ENSSTOP00000003328	ENSSTOP00000001454	Nucleolar protein 11.	Transcription factor A, mitochondrial.	0.756
NRF1	PPARGC1A	ENSSTOP00000007386	ENSSTOP00000026378	Nuclear respiratory factor 1.	PPARG coactivator 1 alpha.	0.946
NRF1	TFAM	ENSSTOP00000007386	ENSSTOP00000001454	Nuclear respiratory factor 1.	Transcription factor A, mitochondrial.	0.787
NRF1	TFB1M	ENSSTOP00000007386	ENSSTOP00000020155	Nuclear respiratory factor 1.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.429
NRF1	TFB2M	ENSSTOP00000007386	ENSSTOP00000029112	Nuclear respiratory factor 1.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.441
POLG	POLRMT	ENSSTOP00000006150	ENSSTOP00000003083	DNA polymerase gamma, catalytic subunit.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.637
POLG	TFAM	ENSSTOP00000006150	ENSSTOP00000001454	DNA polymerase gamma, catalytic subunit.	Transcription factor A, mitochondrial.	0.827
POLRMT	GTF2H1	ENSSTOP00000003083	ENSSTOP00000000013	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	General transcription factor IIH subunit 1.	0.485
POLRMT	GTF2H4	ENSSTOP00000003083	ENSSTOP00000023175	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.477
POLRMT	POLG	ENSSTOP00000003083	ENSSTOP00000006150	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	DNA polymerase gamma, catalytic subunit.	0.637
POLRMT	SRFBP1	ENSSTOP00000003083	ENSSTOP00000022750	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	Serum response factor binding protein 1.	0.988
POLRMT	TFAM	ENSSTOP00000003083	ENSSTOP00000001454	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	Transcription factor A, mitochondrial.	0.996
POLRMT	TFB1M	ENSSTOP00000003083	ENSSTOP00000020155	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.991
POLRMT	TFB2M	ENSSTOP00000003083	ENSSTOP00000029112	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.997