STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF4LCleavage and polyadenylation specific factor 4 like. (174 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.991
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.991
WDR33
WD repeat domain 33.
    
 0.990
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.990
FIP1L1
Fip1 domain-containing protein.
    
 0.990
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.990
WDR82
WD repeat domain 82.
    
 0.989
SYMPK
Symplekin.
    
 0.987
Ssu72
Uncharacterized protein.
    
 0.971
ENSSTOP00000028059
Uncharacterized protein.
    
 0.971
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.