STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
  
 
 0.883
PLA2G4A
Phospholipase A2.
    
 0.711
CALML6
Calmodulin like 6.
   
 0.710
CALML4
Calmodulin like 4.
   
 0.697
TMEM129
Transmembrane protein 129.
   
    0.643
ATF4
Activating transcription factor 4.
   
  0.635
ENSSTOP00000025554
Uncharacterized protein.
 
  
   0.632
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.628
EFCAB3
EF-hand calcium binding domain 3.
   
 0.628
CALM1
Calmodulin 1; Belongs to the calmodulin family.
   
 0.628
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.