Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
  
 
 0.850
ATF4
Activating transcription factor 4.
   
  0.703
CALML6
Calmodulin like 6.
    
 0.677
I3MEP9_ICTTR
Uncharacterized protein.
    
  0.671
CALML4
Calmodulin like 4.
    
 0.663
ADCY9
Adenylate cyclase 9; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.647
CAMKK2
Calcium/calmodulin dependent protein kinase kinase 2.
    
 0.645
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
    
 0.645
ENSSTOP00000025554
Uncharacterized protein.
 
  
   0.643
SLC12A4
Solute carrier family 12 member 4.
    
 
 0.634
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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