Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BUD13 | ZPR1 | ENSSTOP00000002058 | ENSSTOP00000002065 | BUD13 homolog. | ZPR1 zinc finger. | 0.666 |
DNAJC2 | NOC2L | ENSSTOP00000004658 | ENSSTOP00000008891 | DnaJ heat shock protein family (Hsp40) member C2. | NOC2 like nucleolar associated transcriptional repressor. | 0.448 |
DNAJC2 | POLR1A | ENSSTOP00000004658 | ENSSTOP00000011290 | DnaJ heat shock protein family (Hsp40) member C2. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.551 |
DNAJC2 | RPF2 | ENSSTOP00000004658 | ENSSTOP00000018362 | DnaJ heat shock protein family (Hsp40) member C2. | Ribosome production factor 2 homolog. | 0.768 |
DNAJC2 | ZPR1 | ENSSTOP00000004658 | ENSSTOP00000002065 | DnaJ heat shock protein family (Hsp40) member C2. | ZPR1 zinc finger. | 0.644 |
EEF1A2 | ZPR1 | ENSSTOP00000018864 | ENSSTOP00000002065 | Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | ZPR1 zinc finger. | 0.643 |
ENSSTOP00000028274 | ZPR1 | ENSSTOP00000028274 | ENSSTOP00000002065 | Tr-type G domain-containing protein. | ZPR1 zinc finger. | 0.643 |
Eef1a1 | ZPR1 | ENSSTOP00000006867 | ENSSTOP00000002065 | Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | ZPR1 zinc finger. | 0.643 |
NOC2L | DNAJC2 | ENSSTOP00000008891 | ENSSTOP00000004658 | NOC2 like nucleolar associated transcriptional repressor. | DnaJ heat shock protein family (Hsp40) member C2. | 0.448 |
NOC2L | POLR1A | ENSSTOP00000008891 | ENSSTOP00000011290 | NOC2 like nucleolar associated transcriptional repressor. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
NOC2L | RPF2 | ENSSTOP00000008891 | ENSSTOP00000018362 | NOC2 like nucleolar associated transcriptional repressor. | Ribosome production factor 2 homolog. | 0.998 |
NOC2L | WDR3 | ENSSTOP00000008891 | ENSSTOP00000003151 | NOC2 like nucleolar associated transcriptional repressor. | WD repeat domain 3. | 0.946 |
NOC2L | ZPR1 | ENSSTOP00000008891 | ENSSTOP00000002065 | NOC2 like nucleolar associated transcriptional repressor. | ZPR1 zinc finger. | 0.785 |
POLR1A | DNAJC2 | ENSSTOP00000011290 | ENSSTOP00000004658 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DnaJ heat shock protein family (Hsp40) member C2. | 0.551 |
POLR1A | NOC2L | ENSSTOP00000011290 | ENSSTOP00000008891 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | NOC2 like nucleolar associated transcriptional repressor. | 0.924 |
POLR1A | RPF2 | ENSSTOP00000011290 | ENSSTOP00000018362 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ribosome production factor 2 homolog. | 0.942 |
POLR1A | WDR3 | ENSSTOP00000011290 | ENSSTOP00000003151 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | WD repeat domain 3. | 0.956 |
POLR1A | ZPR1 | ENSSTOP00000011290 | ENSSTOP00000002065 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ZPR1 zinc finger. | 0.785 |
RPF2 | DNAJC2 | ENSSTOP00000018362 | ENSSTOP00000004658 | Ribosome production factor 2 homolog. | DnaJ heat shock protein family (Hsp40) member C2. | 0.768 |
RPF2 | NOC2L | ENSSTOP00000018362 | ENSSTOP00000008891 | Ribosome production factor 2 homolog. | NOC2 like nucleolar associated transcriptional repressor. | 0.998 |
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