STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR3B5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (331 aa)    
Predicted Functional Partners:
I3NE76_ICTTR
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.625
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 
 0.595
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
    
 0.451
GRID2
Glutamate ionotropic receptor delta type subunit 2.
    
  0.435
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
     
 0.432
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.424
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
    
 0.423
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
    
 0.423
HTR1F
5-hydroxytryptamine receptor 1F.
   
  
 0.419
HTR7
5-hydroxytryptamine receptor 7; Belongs to the G-protein coupled receptor 1 family.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.