STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOL4Nucleolar protein 4. (638 aa)    
Predicted Functional Partners:
AFDN
Afadin, adherens junction formation factor.
    
 0.560
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
 0.547
RAPGEF4
Rap guanine nucleotide exchange factor 4.
   
 0.519
RAPGEF5
Rap guanine nucleotide exchange factor 5.
   
 0.507
TEX9
Testis expressed 9.
    
   0.479
RASD1
Ras related dexamethasone induced 1.
    
 0.479
RASD2
RASD family member 2.
    
 0.479
I3MGY8_ICTTR
AGC-kinase C-terminal domain-containing protein.
     
 0.464
PRKG1
cGMP-dependent protein kinase.
     
 0.464
FBXL13
F-box and leucine rich repeat protein 13.
   
  
 0.462
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.