STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN1Fibronectin 1. (2474 aa)    
Predicted Functional Partners:
Itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.995
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
    
 0.995
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.995
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
    
 0.995
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.988
ITGB2
Integrin beta.
    
 0.978
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
    
 0.974
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
    
 0.971
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
    
 0.961
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
    
 0.958
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.