Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALK | ALKAL2 | ENSSTOP00000002519 | ENSSTOP00000021419 | Tyrosine-protein kinase receptor. | ALK and LTK ligand 2. | 0.945 |
ALK | EML4 | ENSSTOP00000002519 | ENSSTOP00000024824 | Tyrosine-protein kinase receptor. | EMAP like 4. | 0.965 |
ALK | FRS3 | ENSSTOP00000002519 | ENSSTOP00000005887 | Tyrosine-protein kinase receptor. | Fibroblast growth factor receptor substrate 3. | 0.931 |
ALK | GRB2 | ENSSTOP00000002519 | ENSSTOP00000011345 | Tyrosine-protein kinase receptor. | Growth factor receptor bound protein 2. | 0.939 |
ALK | MDK | ENSSTOP00000002519 | ENSSTOP00000015735 | Tyrosine-protein kinase receptor. | Midkine. | 0.900 |
ALK | PIK3CA | ENSSTOP00000002519 | ENSSTOP00000011575 | Tyrosine-protein kinase receptor. | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. | 0.918 |
ALK | PIK3R1 | ENSSTOP00000002519 | ENSSTOP00000026032 | Tyrosine-protein kinase receptor. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.909 |
ALK | PLCG1 | ENSSTOP00000002519 | ENSSTOP00000010469 | Tyrosine-protein kinase receptor. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.905 |
ALK | PLCG2 | ENSSTOP00000002519 | ENSSTOP00000005174 | Tyrosine-protein kinase receptor. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.895 |
ALK | PTN | ENSSTOP00000002519 | ENSSTOP00000021478 | Tyrosine-protein kinase receptor. | Pleiotrophin. | 0.919 |
ALKAL2 | ALK | ENSSTOP00000021419 | ENSSTOP00000002519 | ALK and LTK ligand 2. | Tyrosine-protein kinase receptor. | 0.945 |
EML4 | ALK | ENSSTOP00000024824 | ENSSTOP00000002519 | EMAP like 4. | Tyrosine-protein kinase receptor. | 0.965 |
EML4 | PIK3CA | ENSSTOP00000024824 | ENSSTOP00000011575 | EMAP like 4. | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. | 0.881 |
EML4 | PIK3R1 | ENSSTOP00000024824 | ENSSTOP00000026032 | EMAP like 4. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.849 |
EML4 | PLCG1 | ENSSTOP00000024824 | ENSSTOP00000010469 | EMAP like 4. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.848 |
FRS3 | ALK | ENSSTOP00000005887 | ENSSTOP00000002519 | Fibroblast growth factor receptor substrate 3. | Tyrosine-protein kinase receptor. | 0.931 |
FRS3 | GRB2 | ENSSTOP00000005887 | ENSSTOP00000011345 | Fibroblast growth factor receptor substrate 3. | Growth factor receptor bound protein 2. | 0.971 |
FRS3 | PIK3R1 | ENSSTOP00000005887 | ENSSTOP00000026032 | Fibroblast growth factor receptor substrate 3. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.620 |
GRB2 | ALK | ENSSTOP00000011345 | ENSSTOP00000002519 | Growth factor receptor bound protein 2. | Tyrosine-protein kinase receptor. | 0.939 |
GRB2 | FRS3 | ENSSTOP00000011345 | ENSSTOP00000005887 | Growth factor receptor bound protein 2. | Fibroblast growth factor receptor substrate 3. | 0.971 |
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