STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PnnUncharacterized protein. (724 aa)    
Predicted Functional Partners:
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.961
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.956
SAP18
Sin3A associated protein 18.
    
 0.951
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.916
BCL2L2-PABPN1
RRM domain-containing protein.
   
 0.890
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.883
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.876
PRPF4B
Pre-mRNA processing factor 4B.
   
 0.874
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
   0.835
CASC3
CASC3 exon junction complex subunit.
    
 0.802
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.