STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD55Ankyrin repeat domain 55. (620 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport 52.
    
 0.815
IFT46
Intraflagellar transport 46.
    
 0.799
LOC101967182
Uncharacterized protein.
    
 0.734
IFT74
Intraflagellar transport 74.
    
 
 0.731
TTC26
Tetratricopeptide repeat domain 26.
    
 0.624
IFT81
Intraflagellar transport 81.
    
 0.606
IFT22
Intraflagellar transport 22.
    
 0.606
IFT88
Intraflagellar transport 88.
   
 0.596
CCDC138
Coiled-coil domain containing 138.
    
 
 0.593
IFT80
Intraflagellar transport 80.
    
 0.585
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.