STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17orf64Chromosome 17 open reading frame 64. (236 aa)    
Predicted Functional Partners:
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.768
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.767
ARID4A
AT-rich interaction domain 4A.
   
 0.767
ARID4B
AT-rich interaction domain 4B.
   
 0.759
POLR2F
RNA polymerase II subunit F.
   
 0.753
INO80C
INO80 complex subunit C.
    
 0.730
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 
 0.725
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
  
 0.724
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.705
SUPT5H
Transcription elongation factor SPT5.
   
 
 0.690
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.