STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAGLUN-acetyl-alpha-glucosaminidase. (743 aa)    
Predicted Functional Partners:
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
     
 0.934
TMED4
Transmembrane p24 trafficking protein 4.
    
   0.731
TMED9
Transmembrane p24 trafficking protein 9.
    
   0.731
SLC24A2
Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.717
NPY2R
Neuropeptide Y receptor Y2; Belongs to the G-protein coupled receptor 1 family.
      
 0.706
RHO
Rhodopsin.
      
 0.650
SGSH
N-sulfoglucosamine sulfohydrolase.
   
  
 0.621
TCAP
Titin-cap.
      
 0.610
Tmed10
GOLD domain-containing protein.
    
   0.608
LOC101963008
GOLD domain-containing protein.
    
   0.608
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.