STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX25DEAD-box helicase 25. (482 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
    
 
 0.957
NUP214
Nucleoporin 214.
    
 
 0.957
LOC101959289
DEAD-box helicase 19B.
  
0.839
MIF4GD
MIF4G domain containing.
    
   0.833
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.833
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
  
0.706
XPO1
Exportin 1.
    
 
 0.695
NXF1
Nuclear RNA export factor 1.
    
 
 0.692
LOC101973495
Uncharacterized protein.
    
 
 0.692
DDX59
DEAD-box helicase 59.
  
0.635
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.