PSMD10 protein (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PAAF1	PSMC2	ENSSTOP00000009605	ENSSTOP00000004673	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.996
PAAF1	PSMC3	ENSSTOP00000009605	ENSSTOP00000009906	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.996
PAAF1	PSMC4	ENSSTOP00000009605	ENSSTOP00000011204	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.997
PAAF1	PSMD10	ENSSTOP00000009605	ENSSTOP00000003387	Proteasomal ATPase associated factor 1.	ANK_REP_REGION domain-containing protein.	0.981
PAAF1	PSMD12	ENSSTOP00000009605	ENSSTOP00000031575	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 12.	0.995
PAAF1	PSMD13	ENSSTOP00000009605	ENSSTOP00000024858	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 13.	0.994
PAAF1	PSMD4	ENSSTOP00000009605	ENSSTOP00000000551	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 4.	0.996
PAAF1	PSMD7	ENSSTOP00000009605	ENSSTOP00000011762	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 7.	0.996
PAAF1	PSMD8	ENSSTOP00000009605	ENSSTOP00000012957	Proteasomal ATPase associated factor 1.	Proteasome 26S subunit, non-ATPase 8.	0.948
PAAF1	Psmc6	ENSSTOP00000009605	ENSSTOP00000012983	Proteasomal ATPase associated factor 1.	26S proteasome regulatory subunit 10B; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.	0.962
PSMC2	PAAF1	ENSSTOP00000004673	ENSSTOP00000009605	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasomal ATPase associated factor 1.	0.996
PSMC2	PSMC3	ENSSTOP00000004673	ENSSTOP00000009906	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.999
PSMC2	PSMC4	ENSSTOP00000004673	ENSSTOP00000011204	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
PSMC2	PSMD10	ENSSTOP00000004673	ENSSTOP00000003387	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	ANK_REP_REGION domain-containing protein.	0.979
PSMC2	PSMD12	ENSSTOP00000004673	ENSSTOP00000031575	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 12.	0.999
PSMC2	PSMD13	ENSSTOP00000004673	ENSSTOP00000024858	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 13.	0.999
PSMC2	PSMD4	ENSSTOP00000004673	ENSSTOP00000000551	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 4.	0.999
PSMC2	PSMD7	ENSSTOP00000004673	ENSSTOP00000011762	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 7.	0.999
PSMC2	PSMD8	ENSSTOP00000004673	ENSSTOP00000012957	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 8.	0.999
PSMC2	Psmc6	ENSSTOP00000004673	ENSSTOP00000012983	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 10B; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.	0.999