STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASE13Ribonuclease A family member 13 (inactive); Belongs to the pancreatic ribonuclease family. (156 aa)    
Predicted Functional Partners:
RNASE11
Ribonuclease A family member 11 (inactive); Belongs to the pancreatic ribonuclease family.
      
 0.594
PATE3
Prostate and testis expressed 3.
      
 0.508
PATE2
Prostate and testis expressed 2.
      
 0.503
PATE1
Prostate and testis expressed 1.
      
 0.501
INTS10
Integrator complex subunit 10.
      
 0.449
LOC101960934
Ribonuclease A E1; Belongs to the pancreatic ribonuclease family.
      
 0.410
PCF11
PCF11 cleavage and polyadenylation factor subunit.
      
 0.408
ZC3H12D
Zinc finger CCCH-type containing 12D.
      
 0.408
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.