STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RITA1RBPJ interacting and tubulin associated 1. (265 aa)    
Predicted Functional Partners:
HIPK1
Homeodomain interacting protein kinase 1.
      
 0.599
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.588
MAP2K5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.558
HIPK3
Homeodomain interacting protein kinase 3.
      
 0.537
Kcnn4
CaMBD domain-containing protein.
      
 0.521
SLAMF9
SLAM family member 9.
  
     0.460
MEGF11
Multiple EGF like domains 11.
      
 0.443
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.442
HIPK2
Homeodomain interacting protein kinase 2.
      
 0.435
VSIG2
V-set and immunoglobulin domain containing 2.
  
     0.432
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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