STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFFBDNA fragmentation factor subunit beta. (341 aa)    
Predicted Functional Partners:
DFFA
DNA fragmentation factor subunit alpha.
    
 0.997
H1-0
H1 histone family member 0.
    
 0.834
Casp3
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.831
ENSSTOP00000031310
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.831
CIDEA
Cell death inducing DFFA like effector a.
    
 0.749
CFLAR
CASP8 and FADD like apoptosis regulator; Belongs to the peptidase C14A family.
    
 0.713
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.702
HP1BP3
Heterochromatin protein 1 binding protein 3.
    
 0.699
CASP7
Caspase 7; Belongs to the peptidase C14A family.
    
 0.691
CENPU
Centromere protein U.
    
 0.691
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.