STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP58Cilia and flagella associated protein 58. (873 aa)    
Predicted Functional Partners:
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.690
DAG1
Dystroglycan 1.
    
  0.620
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.607
TBK1
TANK binding kinase 1.
    
 0.607
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.607
Ikbke
Protein kinase domain-containing protein.
    
 0.607
CFAP61
Cilia and flagella associated protein 61.
      
 0.598
DCC
DCC netrin 1 receptor.
    
 0.573
NEO1
Neogenin 1.
    
 0.573
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
    
 0.573
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.