ABCE1 protein (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCE1	EIF2S1	ENSSTOP00000004154	ENSSTOP00000001402	ATP binding cassette subfamily E member 1.	Eukaryotic translation initiation factor 2 subunit alpha.	0.980
ABCE1	EIF3B	ENSSTOP00000004154	ENSSTOP00000018430	ATP binding cassette subfamily E member 1.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...]	0.983
ABCE1	EIF3J	ENSSTOP00000004154	ENSSTOP00000031235	ATP binding cassette subfamily E member 1.	Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...]	0.987
ABCE1	ETF1	ENSSTOP00000004154	ENSSTOP00000028351	ATP binding cassette subfamily E member 1.	Eukaryotic translation termination factor 1.	0.994
ABCE1	RACK1	ENSSTOP00000004154	ENSSTOP00000006306	ATP binding cassette subfamily E member 1.	Receptor for activated C kinase 1.	0.981
ABCE1	RNASEL	ENSSTOP00000004154	ENSSTOP00000006563	ATP binding cassette subfamily E member 1.	Uncharacterized protein.	0.985
ABCE1	RPS21	ENSSTOP00000004154	ENSSTOP00000000919	ATP binding cassette subfamily E member 1.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.987
ABCE1	RPS7	ENSSTOP00000004154	ENSSTOP00000022900	ATP binding cassette subfamily E member 1.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.988
ABCE1	RPS9	ENSSTOP00000004154	ENSSTOP00000022793	ATP binding cassette subfamily E member 1.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.988
ABCE1	Rps3	ENSSTOP00000004154	ENSSTOP00000024446	ATP binding cassette subfamily E member 1.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.977
EIF2S1	ABCE1	ENSSTOP00000001402	ENSSTOP00000004154	Eukaryotic translation initiation factor 2 subunit alpha.	ATP binding cassette subfamily E member 1.	0.980
EIF2S1	EIF3B	ENSSTOP00000001402	ENSSTOP00000018430	Eukaryotic translation initiation factor 2 subunit alpha.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...]	0.998
EIF2S1	EIF3J	ENSSTOP00000001402	ENSSTOP00000031235	Eukaryotic translation initiation factor 2 subunit alpha.	Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...]	0.995
EIF2S1	ETF1	ENSSTOP00000001402	ENSSTOP00000028351	Eukaryotic translation initiation factor 2 subunit alpha.	Eukaryotic translation termination factor 1.	0.880
EIF2S1	RACK1	ENSSTOP00000001402	ENSSTOP00000006306	Eukaryotic translation initiation factor 2 subunit alpha.	Receptor for activated C kinase 1.	0.976
EIF2S1	RPS21	ENSSTOP00000001402	ENSSTOP00000000919	Eukaryotic translation initiation factor 2 subunit alpha.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.964
EIF2S1	RPS7	ENSSTOP00000001402	ENSSTOP00000022900	Eukaryotic translation initiation factor 2 subunit alpha.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.989
EIF2S1	RPS9	ENSSTOP00000001402	ENSSTOP00000022793	Eukaryotic translation initiation factor 2 subunit alpha.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.988
EIF2S1	Rps3	ENSSTOP00000001402	ENSSTOP00000024446	Eukaryotic translation initiation factor 2 subunit alpha.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.998
EIF3B	ABCE1	ENSSTOP00000018430	ENSSTOP00000004154	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...]	ATP binding cassette subfamily E member 1.	0.983