STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf43Chromosome 12 open reading frame 43. (267 aa)    
Predicted Functional Partners:
Krit1
Uncharacterized protein.
   
    0.771
CRCP
CGRP receptor component.
   
    0.754
CINP
Cyclin dependent kinase 2 interacting protein.
   
    0.751
FRMD8
FERM domain containing 8.
   
    0.614
ANKRD13A
Ankyrin repeat domain 13A.
      
 0.548
GPHA2
Glycoprotein hormone subunit alpha 2.
      
 0.548
Oaz1
Uncharacterized protein.
      
 0.499
FAM78B
Family with sequence similarity 78 member B.
      
 0.452
MMAB
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.429
CPED1
Cadherin like and PC-esterase domain containing 1.
      
 0.412
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.