STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC3A1Solute carrier family 3 member 1. (685 aa)    
Predicted Functional Partners:
SLC7A9
Solute carrier family 7 member 9.
  
 0.990
LOC101954983
Uncharacterized protein.
  
 0.983
SLC7A13
Solute carrier family 7 member 13.
  
 0.966
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.900
SLC7A6
Solute carrier family 7 member 6.
  
 0.858
SLC7A7
Solute carrier family 7 member 7.
  
 0.851
Slc7a5
Uncharacterized protein.
  
 0.849
LOC101975488
Uncharacterized protein.
  
 0.849
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.832
YIPF6
Protein YIPF.
  
 
 0.829
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.