STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKEF1Ankyrin repeat and EF-hand domain containing 1. (776 aa)    
Predicted Functional Partners:
I3MBM0_ICTTR
Uncharacterized protein.
   
 
 0.821
TEKT3
Tektin 3.
   
   0.820
CFAP99
Cilia and flagella associated protein 99.
   
  0.819
WDR38
WD repeat domain 38.
   
  0.817
TSNAXIP1
Translin associated factor X interacting protein 1.
   
  0.814
DNAH10
Dynein axonemal heavy chain 10.
   
  0.811
FBXO36
F-box protein 36.
   
 
  0.774
CCDC65
Coiled-coil domain containing 65.
   
    0.771
RSPH6A
Radial spoke head 6 homolog A.
   
   0.728
RSPH4A
Radial spoke head component 4A.
   
   0.728
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.