STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO10Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2048 aa)    
Predicted Functional Partners:
DCC
DCC netrin 1 receptor.
    
 0.962
NEO1
Neogenin 1.
    
 0.939
WHRN
Whirlin.
    
 0.785
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.741
USH1G
USH1 protein network component sans.
   
 0.741
USH1C
USH1 protein network component harmonin.
   
 0.714
ACTA2
Actin alpha 2, smooth muscle.
    
 0.691
ACTL10
Actin like 10; Belongs to the actin family.
    
 0.691
ACTA1
Actin alpha 1, skeletal muscle.
    
 0.691
ACTC1
Actin alpha cardiac muscle 1.
    
 0.691
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.