STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR6Myotubularin related protein 6. (621 aa)    
Predicted Functional Partners:
MTMR9
Myotubularin related protein 9.
  
0.985
LOC101958718
Myotubularin phosphatase domain-containing protein.
  
0.901
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.890
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.880
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.876
PLCD3
Phosphoinositide phospholipase C.
     
 0.858
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.858
MTMR3
Myotubularin related protein 3.
    
0.854
MTMR4
Myotubularin related protein 4.
    
0.853
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
     
 0.852
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.