STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101967743Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (416 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
    
 0.995
PER2
Period circadian regulator 2.
    
 0.992
Ltv1
LTV1 ribosome biogenesis factor.
    
 0.986
PER1
Period circadian regulator 1.
    
 0.984
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.984
PER3
Period circadian regulator 3.
    
 0.976
CRY2
Cryptochrome circadian regulator 2.
    
 0.974
BYSL
Bystin like.
    
 0.962
RIOK2
RIO kinase 2.
    
 0.956
CSNK1D
Casein kinase 1 delta.
  
 
0.951
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.