STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSBN1Round spermatid basic protein 1. (804 aa)    
Predicted Functional Partners:
PHTF1
Putative homeodomain transcription factor 1.
 
    
 0.768
BCAS2
BCAS2 pre-mRNA processing factor.
      
 0.573
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
      
 0.497
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
 
    
 0.475
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
      
 0.456
SPAG4
Sperm associated antigen 4.
      
 0.446
NCAPD2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
      
 0.440
SMC4
Structural maintenance of chromosomes protein.
    
 
 0.425
OLFML3
Olfactomedin like 3.
      
 0.418
MTMR10
Myotubularin related protein 10.
      
 0.414
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.