STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC16Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (378 aa)    
Predicted Functional Partners:
SKA1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.651
CLSPN
Claspin.
   
 
 0.585
TIMELESS
Timeless circadian regulator.
   
 
 0.579
TIPIN
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
 
 0.574
RPA3
Replication protein A3.
   
   0.569
RFWD3
Ring finger and WD repeat domain 3.
    
   0.564
Pgp
Uncharacterized protein.
    
 
 0.486
Ska2
SKA2 domain-containing protein.
   
 
 0.467
ENSSTOP00000027781
Uncharacterized protein.
   
 
 0.467
ZDHHC21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.465
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.