STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC1Kelch domain containing 1. (326 aa)    
Predicted Functional Partners:
POLE2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
 
  
   0.650
SLC25A1
Solute carrier family 25 member 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.641
GRN
Granulin precursor.
    
   0.641
CXorf56
Chromosome X open reading frame 56.
    
   0.641
CS
Citrate synthase; Belongs to the citrate synthase family.
    
   0.641
C15orf40
Chromosome 15 open reading frame 40.
    
   0.641
I3N248_ICTTR
Uncharacterized protein.
    
 0.602
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 
 0.593
Csnk2a1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.593
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
   
 0.591
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.