STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMRTB1DMRT like family B with proline rich C-terminal 1. (337 aa)    
Predicted Functional Partners:
KPTN
Kaptin, actin binding protein.
    
 0.736
Depdc5
DEP domain-containing protein.
    
 0.719
WDR59
WD repeat domain 59.
    
 0.716
WDR24
WD repeat domain 24.
    
 0.711
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.707
XRCC4
X-ray repair cross complementing 4.
    
 0.660
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.660
IMMP1L
Mitochondrial inner membrane protease subunit.
    
 0.660
NPRL3
NPR3 like, GATOR1 complex subunit.
     
 0.580
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
    
 0.567
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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