STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YAF2YY1 associated factor 2. (204 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.972
PCGF1
Polycomb group ring finger 1.
    
 0.963
PCGF6
Polycomb group ring finger 6.
    
 0.957
PCGF5
Polycomb group ring finger 5.
    
 0.956
Rnf2
RING-type domain-containing protein.
    
 0.945
ENSSTOP00000028844
Uncharacterized protein.
    
 0.945
PCGF2
Polycomb group ring finger 2.
    
 0.940
PCGF3
Polycomb group ring finger 3.
    
 0.936
KDM2B
Lysine demethylase 2B.
    
 
 0.931
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.920
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.