STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN2Actinin alpha 2. (894 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
 
 0.979
VCL
Vinculin.
   
 0.943
ENSSTOP00000027973
Uncharacterized protein.
   
 0.927
ACTN3
Actinin alpha 3 (gene/pseudogene).
  
0.886
ENSSTOP00000024410
Uncharacterized protein.
   
 0.870
ENSSTOP00000025554
Uncharacterized protein.
   
 0.870
SPEGNB
SPEG neighbor.
   
 0.870
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 0.868
MYOZ2
Myozenin 2.
   
 
 0.855
MYL1
Myosin light chain 1.
   
 0.838
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.