STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLBD2Phospholipase B-like; Putative phospholipase. (589 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2.
     
 0.690
Rnaset2
Uncharacterized protein; Belongs to the RNase T2 family.
      
 0.577
GLG1
Golgi glycoprotein 1.
      
 0.577
APLP2
Amyloid beta precursor like protein 2.
      
 0.576
RFTN2
Raftlin family member 2.
      
 0.558
ARL6IP6
ADP ribosylation factor like GTPase 6 interacting protein 6.
      
 0.553
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
      
 0.530
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.511
LOC101961988
Ribosomal_S10 domain-containing protein.
      
 0.482
LYPD3
LY6/PLAUR domain containing 3.
      
 0.476
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.