STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (509 aa)    
Predicted Functional Partners:
UBXN6
UBX domain protein 6.
    
 0.995
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.995
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.982
SPATA5
Spermatogenesis associated 5.
    
 0.963
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.963
NSFL1C
NSFL1 cofactor.
    
 0.918
UBXN8
UBX domain protein 8.
   
 
 0.905
UBXN2A
UBX domain protein 2A.
    
 0.904
UBXN1
UBX domain protein 1.
     
0.900
UBXN2B
UBX domain protein 2B.
    
 0.887
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.