STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA5Cholinergic receptor nicotinic alpha 5 subunit. (468 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.903
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
 
0.881
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
  
0.873
I3NE76_ICTTR
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.870
CHRNB2
Cholinergic receptor nicotinic beta 2 subunit.
  
0.866
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
  
 
0.858
CHRNA3
Cholinergic receptor nicotinic alpha 3 subunit.
  
 
0.844
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit.
  
 
0.811
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
  
 
0.806
CHRND
Cholinergic receptor nicotinic delta subunit.
    
0.767
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.