STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEXBBeta-hexosaminidase. (538 aa)    
Predicted Functional Partners:
Hexa
Beta-hexosaminidase.
  
 
0.995
GLB1
Beta-galactosidase.
  
 
 0.917
Hexd
Uncharacterized protein.
     
 0.902
GLA
Alpha-galactosidase.
   
 
 0.891
NAGA
Alpha-galactosidase.
   
 
 0.891
GNS
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.889
GM2A
GM2 ganglioside activator.
    
 0.862
ST8SIA1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.860
ST3GAL5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
     
 0.860
CHIA
Chitinase acidic; Belongs to the glycosyl hydrolase 18 family.
    
 0.859
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.