STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A8Solute carrier family 38 member 8. (432 aa)    
Predicted Functional Partners:
RRAGB
Ras related GTP binding B.
   
 0.645
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.640
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.630
LAMTOR4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.597
RRAGD
Ras related GTP binding D.
    
 0.575
SIN3B
SIN3 transcription regulator family member B.
    
 0.575
SIN3A
SIN3 transcription regulator family member A.
    
 0.575
I3N4J8_ICTTR
Uncharacterized protein.
    
 0.574
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.574
RRAGC
Ras related GTP binding C.
    
 0.571
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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