STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECM1Extracellular matrix protein 1. (544 aa)    
Predicted Functional Partners:
MRC1
Mannose receptor C-type 1.
     
 0.648
ZBTB44
Zinc finger and BTB domain containing 44.
    
 
 0.636
DDX52
DExD-box helicase 52.
      
 0.609
SLC39A13
Solute carrier family 39 member 13.
      
 0.609
SLC15A2
Solute carrier family 15 member 2.
      
 0.608
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.605
MRPS14
Mitochondrial ribosomal protein S14.
      
 0.605
BMS1
BMS1 ribosome biogenesis factor.
      
 0.602
CLEC3B
C-type lectin domain family 3 member B.
     
 0.577
TIMP3
TIMP metallopeptidase inhibitor 3.
     
 0.539
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.