STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST11Carbohydrate sulfotransferase. (357 aa)    
Predicted Functional Partners:
CHST12
Carbohydrate sulfotransferase.
  
  
 
0.843
CHST8
Carbohydrate sulfotransferase.
  
  
 
0.784
CHST9
Carbohydrate sulfotransferase.
  
  
 
0.781
CSGALNACT1
Hexosyltransferase.
     
 0.636
DCN
Decorin; May affect the rate of fibrils formation.
     
 0.612
BCAN
Brevican.
     
 0.592
CHSY1
Hexosyltransferase.
     
 0.570
CHSY3
Hexosyltransferase.
     
 0.570
COP1
COP1 E3 ubiquitin ligase.
      
 0.569
CSPG4
Chondroitin sulfate proteoglycan 4.
    
 0.547
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.