STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Babam1BRISC and BRCA1 A complex member 1. (335 aa)    
Predicted Functional Partners:
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.999
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.999
I3N0J6_ICTTR
RAP80_UIM domain-containing protein.
    
 0.998
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.997
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.997
BARD1
BRCA1 associated RING domain 1.
    
 0.988
Brca1
Uncharacterized protein.
    
 0.979
ENSSTOP00000027930
Uncharacterized protein.
    
 0.979
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.954
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.932
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.