STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP2Receptor expression-enhancing protein. (254 aa)    
Predicted Functional Partners:
REEP1
Receptor expression-enhancing protein.
  
 
 
0.732
RTN2
Reticulon.
   
 
 0.678
ATL1
Atlastin GTPase 1.
    
 
 0.635
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
    
 
 0.606
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.595
REEP4
Receptor expression-enhancing protein.
  
 
 
0.584
RTN1
Reticulon.
   
 
 0.559
REEP6
Receptor expression-enhancing protein.
  
 
 
0.535
TBC1D20
TBC1 domain family member 20.
      
 0.520
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.515
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.