STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM244Transmembrane protein 244. (152 aa)    
Predicted Functional Partners:
TMEM141
Transmembrane protein 141.
      
 0.604
PUSL1
tRNA pseudouridine synthase.
      
 0.600
RSRC1
Arginine and serine rich coiled-coil 1.
      
 0.555
SNAP47
Synaptosome associated protein 47.
   
  
 0.551
C1orf115
Chromosome 1 open reading frame 115.
      
 0.450
RASGEF1C
RasGEF domain family member 1C.
      
 0.450
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.443
Kif16b
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.417
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.