STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4IP1Reticulon 4 interacting protein 1. (396 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
    
 0.887
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.877
FASN
Fatty acid synthase.
  
 0.776
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.773
Adhfe1
Fe-ADH domain-containing protein.
    
 0.741
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.720
ENSSTOP00000030369
Uncharacterized protein.
  
 0.718
HKDC1
Hexokinase domain containing 1.
   
 0.692
HK2
Hexokinase 2.
   
 0.692
GCK
Phosphotransferase.
   
 0.692
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.