STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM209Transmembrane protein 209. (561 aa)    
Predicted Functional Partners:
CCDC58
Coiled-coil domain containing 58.
      
 0.564
COA8
Cytochrome c oxidase assembly factor 8.
      
 0.531
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
    0.499
TTC9C
Tetratricopeptide repeat domain 9C.
   
    0.487
ORC5
Origin recognition complex subunit 5.
   
    0.456
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
      
 0.450
PUM3
Pumilio RNA binding family member 3.
      
 0.449
NUP43
Nucleoporin 43.
   
  
 0.444
DDO
D-aspartate oxidase.
      
 0.438
CGGBP1
CGG triplet repeat binding protein 1.
      
 0.426
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.