STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP3LDL receptor related protein 3. (750 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
  0.787
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.787
ITSN2
Intersectin 2.
    
 0.757
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.739
APLP1
Amyloid beta precursor like protein 1.
    
 0.702
RELN
Reelin.
    
 0.682
CORIN
Corin, serine peptidase.
    
0.641
ITSN1
Intersectin 1.
    
 0.609
APOB
Apolipoprotein B.
    
 0.608
HSPG2
Heparan sulfate proteoglycan 2.
    
0.603
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.