STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX6Peroxisomal biogenesis factor 6. (982 aa)    
Predicted Functional Partners:
PEX1
Peroxisomal biogenesis factor 1.
  
0.998
Ubxn7
UBX domain-containing protein 7.
   
 0.985
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.983
PEX14
Peroxisomal biogenesis factor 14.
    
 0.981
PEX26
Peroxisomal biogenesis factor 26.
    
 0.958
FAM185A
Family with sequence similarity 185 member A.
    
 0.947
PEX5
Peroxisomal biogenesis factor 5.
   
 0.945
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.934
PEX13
Peroxisomal biogenesis factor 13.
    
 0.923
PEX10
Peroxisomal biogenesis factor 10.
   
 0.915
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.