STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL3Kirre like nephrin family adhesion molecule 3. (753 aa)    
Predicted Functional Partners:
NPHS1
NPHS1 adhesion molecule, nephrin.
   
0.987
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 0.704
NCK2
Cytoplasmic protein.
    
 0.674
NCK1
Cytoplasmic protein.
    
 0.670
CD2AP
CD2 associated protein.
    
 0.665
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.644
ABCC4
ATP binding cassette subfamily C member 4.
   
 0.613
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
0.612
CNTN5
Contactin 5.
    
 0.604
FYN
Tyrosine-protein kinase.
    
  0.597
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.